Interactive maps
Metabolic maps of the gut microbiota
Module map
Hierarchy map
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This metabolic map consists of gut-specific pathway modules connected by their input and output compounds. The modules are
clustered and colored according to their hierarchical classification (e.g. amino-acid degradation). Metabolites are represented by circles,
while modules are represented by colored lines. The flow of compounds is from top to bottom unless the module is represented by a dashed line.
Scroll to zoom, drag to pan, click a module for details.
image/svg+xml image/svg+xml image/svg+xml alpha,alpha-Trehalose D-Galactose D-Glucose 6-phosphate Lactose 6-phosphate Acceptor beta-D-glucuronoside 2-Dehydro-3-deoxy-6-phospho-D-gluconate L-2-Amino-4-mercaptobutyric acid L-2-Amino-4methylthiobutyric acid Succinyl coenzyme A (S)-alpha-Amino-beta-phenylpropionic acid 2-Aminosuccinic acid 2-Aminosuccinamic acid 2-Oxobutanedioic acid L-Selenocysteine 2-Ketobutyric acid Methanethiol Butanoate Aminoacetic acid (6R)-5,10-Methylenetetrahydrofolate Propanoate 2-(Methylthio)ethanesulfonate Benzeneacetic acid 2-Hydroxypropanal 1-Hydroxypropane Fumarate 2,6-Diaminohexanoic acid 1,5-Diaminopentane 3-Acetoacetyl-CoA D-Mannitol 1-phosphate D-Mannose 6-phosphate Starch 6-O-(alpha-D-Galactopyranosyl)-D-glucopyranose beta-D-Glucose alpha-D-Galactose L-Arabinopyranose L-Arabinoketose D-Fructose 1-phosphate beta-D-Fructose 1,6-bisphosphate D-Ribose D-Ribose 5-phosphate beta-D-Fructan beta-D-arabino-Hexulose D-Glucitol D-arabino-Hexulose H2O2 H2O O2- (6S)-Tetrahydrofolate Triacylglycerol 1,3-Propanediol D-Arabinitol Xylitol D-Xylose D-Xylulose 5-phosphate Adonitol N-Acetyl-D-glucosamine 6-phosphate 5-Acetamido-3,5-dideoxy-D-glycero-D-galacto-2-nonulosonic acid D-Allose Central metabolism Alcohol metabolism Glycoprotein degradation Lipid degradation Protection against oxidative stress Gas metabolism Amino acid degradation Inorganic nutrient metabolism Carbohydrate degradation Bile acid degradation Amines and polyamines degradation Organic acid degradation Chorismate Menaquinol 2-Amino-3-methylbutyric acid 2-Hydroxypropanoic acid 2-Pyrrolidinecarboxylic acid Dihydrolipoate 5-Aminopentanoate Lipoate Sulfate 2-Amino-3-hydroxybutyric acid L-2-Amino-3-hydroxypropionic acid (S)-alpha-Amino-beta-(3-indolyl)-propionic acid Nitrate L-2-Aminoglutaramic acid (S)-alpha-Amino-1H-imidazole-4-propionic acid Glycogen O2 H+ Reduced ferredoxin H2 Oxidized ferredoxin Methane H2S Hydrogen cyanide L-2-Amino-3-mercaptopropionic acid 3alpha,7alpha,12alpha-Trihydroxy-5beta-cholan-24-oylglycine Carbon dioxide 2,3-Benzopyrrole Fatty acid Poly-beta-hydroxybutyrate N-Acetyl-D-glucosamine (S)-2-Amino-5-guanidinovaleric acid 1,4-Butanediamine Carbamide 4-Aminobutanoate Thiocyanate 2-Ketoglutaric acid 2-Butenoyl-CoA Glutamate 2-Amino-3-methylvaleric acid Ammonia Butanedionic acid Acetate Propanoyl-CoA PEP H2 2-Amino-3-methylbutyric acid (S)-3-Amino-2-methylpropanoate 3-Oxobutanoic acid (2S)-alpha-2-Amino-4-methylvaleric acid Benzenol L-2-Aminopropionic acid (S)-2-Amino-3-(p-hydroxyphenyl)propionic acid Endotoxin biosynthesis Secondary metabolites Dehydrated ethanol Formate Acetyl coenzyme A D-Galacturonate (S)-Lactaldehyde D-Galactitol 1-phosphate 6-Deoxy-L-galactose 6-Deoxy-L-mannose Pectin D-Glucarate D-Galactarate D-Galactonate 2-Phospho-D-glycerate 1,2,3-Propanetriol Acetyl phosphate 6-Phospho-D-gluconate 2-Oxopropanoate (2R)-2-Hydroxy-3-(phosphonooxy)-propanal D-Fructose 6-phosphate D-Ribulose 5-phosphate alpha-D-Glucopyranosyl-(1->4)-D-glucopyranose D-gluco-Hexonic acid 1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside beta-D-Fructose 6-phosphate alpha-D-Glucose alpha-D-Glucose 1-phosphate beta-D-Glucose 6-phosphate D-Glucose 1-beta-D-Galactopyranosyl-4-alpha-D-glucopyranose Methanol
A high-level metabolic map that gives an overview of the major metabolic processes in the gut. Click a process to list its modules.
image/svg+xml CO2 metabolism CO2 Hydrogen metabolism H2 Methane metabolism CH4 #Energy storage Energy storage Butyrate production Butyrate Acetate production Acetate Propionate production Propionate Monosaccharide degradation Monosaccharides Disaccharide degradation Disaccharides Polysaccharide degradation Polysaccharides Sugar acid degradation Sugar acid Mucus degradation Mucus Degradation Lipolytic fermentation Lipolytic Fermentation Proteolytic fermentation Proteolytic Fermentation Oxidative stress ROS Nitrate metabolism RNS Acetogenesis Acetogenesis Ethanol production Ethanol central metabolism Central Metabolism Sugar alcohol degradation Sugar alcohol Ammonia production NH3 Sulfate metabolism Sulfate reduction cross-feeding intermediate metabolism cross-feeding intermediate metabolism Cross-feeding