Species–function relationships shape ecological properties of the human gut microbiome
Nature Microbiology 1(8):16088 (2016) · doi:10.1038/nmicrobiol.2016.88
Interactive metabolic maps of the gut-specific pathway modules (GMMs). The module map connects modules by their input and output compounds; the hierarchy map gives an overview of the major metabolic processes in the gut.
Metabolic maps
Open the interactive metabolic maps
The module map consists of gut-specific pathway modules connected by their input and output compounds. Modules are clustered and coloured according to their hierarchical classification (e.g. amino-acid degradation); metabolites are circles and modules are coloured lines. The hierarchy map is a high-level map of the major metabolic processes in the gut. Click a module or process to see its details.
Download
| File | Description | Size | |
|---|---|---|---|
| Supplementary_Data_1.txt | Detailed description of the module set (module definitions with compounds, orthologues and hierarchy). | 26 KB | Download |
How to cite
If you use these data, please cite the original publication:
Vieira-Silva S, Falony G, Darzi Y, Lima-Mendez G, Garcia Yunta R, Okuda S, Vandeputte D, Valles-Colomer M, Hildebrand F, Chaffron S, Raes J. Species–function relationships shape ecological properties of the human gut microbiome. Nature Microbiology 1(8):16088 (2016). https://doi.org/10.1038/nmicrobiol.2016.88
@article{vieirasilva2016species,
title = {{Species–function relationships shape ecological properties of the human gut microbiome}},
author = {Vieira-Silva, S. and Falony, G. and Darzi, Y. and Lima-Mendez, G. and Garcia Yunta, R. and Okuda, S. and Vandeputte, D. and Valles-Colomer, M. and Hildebrand, F. and Chaffron, S. and Raes, J.},
journal = {Nature Microbiology},
year = {2016},
volume = {1},
number = {8},
pages = {16088},
doi = {10.1038/nmicrobiol.2016.88}
}