Companion website · Nature Microbiology 2019

Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses

Vieira-Silva S, Sabino J, Valles-Colomer M, Falony G, Kathagen G, Caenepeel C, Cleynen I, van der Merwe S, Vermeire S, Raes J

Nature Microbiology 4(11):1826–1831 (2019) · doi:10.1038/s41564-019-0483-9

Quantitative microbiome profiling (QMP) matrix for the study dataset used in the article.

Animation

Data

FileDescriptionSize
QMP.matrix.tsvQuantitative microbiome profiling (QMP) matrix: genus-level abundances per sample (tab-separated).246 KBDownload

How to cite

If you use these data, please cite the original publication:

Vieira-Silva S, Sabino J, Valles-Colomer M, Falony G, Kathagen G, Caenepeel C, Cleynen I, van der Merwe S, Vermeire S, Raes J. Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses. Nature Microbiology 4(11):1826–1831 (2019). https://doi.org/10.1038/s41564-019-0483-9

@article{vieirasilva2019quantitative,
  title   = {{Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses}},
  author  = {Vieira-Silva, S. and Sabino, J. and Valles-Colomer, M. and Falony, G. and Kathagen, G. and Caenepeel, C. and Cleynen, I. and van der Merwe, S. and Vermeire, S. and Raes, J.},
  journal = {Nature Microbiology},
  year    = {2019},
  volume  = {4},
  number  = {11},
  pages   = {1826--1831},
  doi     = {10.1038/s41564-019-0483-9}
}

Resources

Article
doi:10.1038/s41564-019-0483-9
QMP method
raeslab/QMP
Original page
raeslab.org/software/QMP2/ (archived Raes Lab website)